JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACER3_chr11_76855918_77031797	0/0	g0313	1	0	1	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0314	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0315	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0316	1	0	0	0	0	1	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0317	1	0	1	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0318	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0319	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0320	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0321	1	0	0	0	0	1	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0322	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0323	1	0	0	0	0	1	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0324	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0325	1	0	1	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0326	1	0	0	0	1	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0327	1	0	1	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0328	1	0	1	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0329	1	0	0	1	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0330	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0331	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0332	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0333	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0334	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0335	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0336	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0337	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0338	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0339	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0340	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0341	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0342	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0343	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0344	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0345	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACER3_chr11_76855918_77031797	0/0	g0346	1	1	0	0	0	0	ACER3	chr11	76855918	77031797
ACE_chr17_63472061_63503373	0/1	g0001	67	3	20	30	1	12	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0002	62	4	13	38	2	5	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0003	13	11	2	0	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0004	8	0	2	5	1	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0005	8	0	0	8	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0006	6	0	1	4	0	1	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0007	6	0	3	0	1	2	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0008	5	0	0	5	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0009	5	0	1	0	2	2	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0010	4	2	0	0	0	2	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0011	4	0	0	4	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0012	4	4	0	0	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0013	4	0	0	4	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0014	3	3	0	0	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0015	3	0	0	3	0	0	ACE	chr17	63472061	63503373
ACE_chr17_63472061_63503373	0/0	g0016	3	3	0	0	0	0	ACE	chr17	63472061	63503373