JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BNIP2_chr15_59654146_59694320	0/0	g0227	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0228	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0229	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0230	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0231	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0232	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0233	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0234	1	0	0	0	0	1	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0235	1	0	0	0	1	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0236	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0237	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0238	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0239	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0240	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0241	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0242	1	1	0	0	0	0	BNIP2	chr15	59654146	59694320
BNIP2_chr15_59654146_59694320	0/0	g0243	1	0	0	1	0	0	BNIP2	chr15	59654146	59694320
BNIP3L_chr8_26378054_26418127	0/0	g0001	17	0	3	8	5	1	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0002	15	0	0	15	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0003	10	0	4	6	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0004	9	0	1	8	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0005	7	0	4	0	3	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0006	6	0	0	6	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0007	6	0	0	6	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0008	6	0	1	0	0	5	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0009	5	0	0	5	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0010	5	0	5	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0011	5	0	2	0	2	1	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0012	5	1	2	0	0	2	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0013	4	0	0	4	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0014	4	0	0	4	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0015	4	0	0	4	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0016	3	0	0	3	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0017	3	3	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0018	3	3	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0019	3	0	3	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0020	3	0	0	0	0	3	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0021	3	0	1	2	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0022	3	3	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0023	3	3	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0024	3	3	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0025	3	1	2	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0026	2	2	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0027	2	0	2	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0028	2	0	0	2	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0029	2	2	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0030	2	2	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0031	2	2	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0032	2	2	0	0	0	0	BNIP3L	chr8	26378054	26418127
BNIP3L_chr8_26378054_26418127	0/0	g0033	2	2	0	0	0	0	BNIP3L	chr8	26378054	26418127