JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
UPK3B_chr7_76505552_76521522	0/0	g0033	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0034	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0035	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0036	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0037	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0038	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0039	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0040	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0041	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0042	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0043	1	0	0	0	1	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0044	1	0	0	0	1	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0045	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0046	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0047	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	1/0	g0048	1	0	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0049	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0050	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0051	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0052	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0053	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0054	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0055	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0056	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0057	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0058	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0059	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0060	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0061	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0062	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0063	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0064	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0065	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0066	1	0	0	0	0	1	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0067	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0068	1	1	0	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0069	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0070	1	0	1	0	0	0	UPK3B	chr7	76505552	76521522
UPK3B_chr7_76505552_76521522	0/0	g0071	1	0	0	1	0	0	UPK3B	chr7	76505552	76521522
UPP1_chr7_48084265_48113736	0/0	g0001	61	9	14	21	7	10	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0002	54	1	14	35	2	2	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0003	46	1	5	36	1	3	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0004	34	2	7	16	0	9	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0005	26	3	3	19	0	1	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0006	11	0	0	11	0	0	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0007	8	7	1	0	0	0	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0008	7	7	0	0	0	0	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0009	6	0	5	0	0	1	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0010	6	6	0	0	0	0	UPP1	chr7	48084265	48113736
UPP1_chr7_48084265_48113736	0/0	g0011	6	6	0	0	0	0	UPP1	chr7	48084265	48113736