JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
UQCC1_chr20_35297578_35416973	0/0	g0246	1	1	0	0	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0247	1	1	0	0	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0248	1	1	0	0	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0249	1	1	0	0	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0250	1	1	0	0	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0251	1	1	0	0	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0252	1	0	0	0	1	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0253	1	0	0	1	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0254	1	0	0	1	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0255	1	0	0	1	0	0	UQCC1	chr20	35297578	35416973
UQCC1_chr20_35297578_35416973	0/0	g0256	1	0	0	1	0	0	UQCC1	chr20	35297578	35416973
UQCC2_chr6_33691764_33716700	0/0	g0001	65	3	19	27	4	12	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0002	46	2	4	31	1	8	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0003	21	2	8	7	2	2	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0004	19	16	0	1	1	1	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	1/0	g0005	17	13	1	1	0	1	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0006	16	0	0	16	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/1	g0007	16	2	4	7	2	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0008	13	0	1	12	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0009	9	0	1	7	0	1	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0010	7	0	2	5	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0011	7	6	1	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0012	7	0	1	4	0	2	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0013	6	6	0	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0014	6	0	0	6	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0015	5	4	1	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0016	5	0	0	5	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0017	5	1	4	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0018	5	0	1	4	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0019	4	2	0	1	1	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0020	4	0	3	1	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0021	3	0	0	3	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0022	3	0	0	3	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0023	3	0	0	1	0	2	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0024	3	1	1	0	1	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0025	3	0	0	3	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0026	3	2	1	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0027	2	0	0	2	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0028	2	0	0	1	0	1	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0029	2	0	0	2	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0030	2	0	0	2	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0031	2	0	2	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0032	2	0	0	0	0	2	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0033	2	0	2	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0034	2	2	0	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0035	2	2	0	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0036	2	2	0	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0037	2	0	0	2	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0038	2	2	0	0	0	0	UQCC2	chr6	33691764	33716700
UQCC2_chr6_33691764_33716700	0/0	g0039	2	2	0	0	0	0	UQCC2	chr6	33691764	33716700