JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
UQCC5_chr3_52531605_52546890	0/0	g0014	2	0	0	1	0	1	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0015	2	0	0	2	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0016	2	0	0	2	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0017	2	0	0	2	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0018	2	2	0	0	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0019	2	2	0	0	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0020	1	0	0	1	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0021	1	0	0	1	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0022	1	0	0	0	0	1	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0023	1	0	0	0	0	1	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0024	1	0	0	1	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0025	1	1	0	0	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0026	1	0	0	0	0	1	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0027	1	0	0	1	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0028	1	0	0	1	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0029	1	1	0	0	0	0	UQCC5	chr3	52531605	52546890
UQCC5_chr3_52531605_52546890	0/0	g0030	1	1	0	0	0	0	UQCC5	chr3	52531605	52546890
UQCC6_chr12_103945194_103962215	0/0	g0001	67	6	2	47	2	10	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0002	47	1	3	42	0	1	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0003	46	3	0	43	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/1	g0004	43	7	15	1	5	14	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0005	41	0	4	34	0	3	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	1/0	g0006	31	17	9	0	2	2	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0007	26	1	19	1	1	4	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0008	19	0	7	8	2	2	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0009	17	17	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0010	14	6	6	0	2	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0011	11	0	0	11	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0012	9	8	1	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0013	7	7	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0014	5	0	0	0	0	5	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0015	4	0	0	4	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0016	4	4	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0017	4	3	0	0	1	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0018	4	4	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0019	4	0	3	1	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0020	4	0	0	4	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0021	3	3	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0022	3	0	0	3	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0023	2	0	0	0	1	1	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0024	2	0	0	0	0	2	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0025	2	0	1	0	0	1	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0026	2	0	0	0	0	2	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0027	2	2	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0028	2	0	2	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0029	1	0	0	1	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0030	1	0	0	1	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0031	1	1	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0032	1	1	0	0	0	0	UQCC6	chr12	103945194	103962215
UQCC6_chr12_103945194_103962215	0/0	g0033	1	0	0	1	0	0	UQCC6	chr12	103945194	103962215