JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
UQCR11_chr19_1592169_1610462	0/0	g0096	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0097	1	0	0	0	1	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0098	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0099	1	0	0	1	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0100	1	0	1	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0101	1	0	0	1	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0102	1	0	1	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0103	1	0	0	1	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0104	1	0	0	1	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0105	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0106	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0107	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0108	1	0	0	1	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0109	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0110	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0111	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0112	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0113	1	0	0	1	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0114	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCR11_chr19_1592169_1610462	0/0	g0115	1	1	0	0	0	0	UQCR11	chr19	1592169	1610462
UQCRB_chr8_96217947_96240545	1/1	g0001	96	8	19	48	5	14	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0002	46	3	11	22	2	8	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0003	15	14	1	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0004	14	0	2	12	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0005	12	1	9	2	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0006	10	4	0	4	0	2	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0007	9	0	0	9	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0008	8	7	1	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0009	8	0	0	8	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0010	8	2	1	4	1	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0011	7	7	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0012	7	0	1	6	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0013	6	0	4	0	2	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0014	5	5	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0015	4	0	0	4	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0016	4	3	0	0	0	1	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0017	4	0	4	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0018	4	3	1	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0019	4	0	0	4	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0020	4	0	0	4	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0021	3	0	0	3	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0022	3	3	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0023	3	0	2	0	1	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0024	3	3	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0025	2	0	0	0	0	2	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0026	2	2	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0027	2	2	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0028	2	2	0	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0029	2	0	2	0	0	0	UQCRB	chr8	96217947	96240545
UQCRB_chr8_96217947_96240545	0/0	g0030	2	2	0	0	0	0	UQCRB	chr8	96217947	96240545