JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
UQCRFS1_chr19_29200320_29218151	0/0	g0057	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0058	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0059	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0060	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0061	1	0	0	0	0	1	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0062	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0063	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0064	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0065	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0066	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0067	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0068	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0069	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0070	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0071	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0072	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0073	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0074	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0075	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0076	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0077	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0078	1	0	0	0	0	1	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0079	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0080	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0081	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0082	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0083	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0084	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0085	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0086	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0087	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0088	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0089	1	1	0	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0090	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0091	1	0	1	0	0	0	UQCRFS1	chr19	29200320	29218151
UQCRFS1_chr19_29200320_29218151	0/0	g0092	1	0	0	1	0	0	UQCRFS1	chr19	29200320	29218151
UQCRHL_chr1_15802374_15812649	0/0	g0000	364	88	70	146	16	44	UQCRHL	chr1	15802374	15812649
UQCRH_chr1_46298698_46321776	0/1	g0001	28	2	8	11	2	4	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0002	27	1	1	23	0	2	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0003	14	0	1	11	2	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0004	10	0	2	8	0	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0005	7	0	0	7	0	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0006	6	2	2	0	0	2	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0007	6	0	3	2	0	1	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0008	6	2	1	3	0	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0009	5	0	1	4	0	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0010	5	1	0	4	0	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0011	5	0	1	0	1	3	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0012	5	4	1	0	0	0	UQCRH	chr1	46298698	46321776
UQCRH_chr1_46298698_46321776	0/0	g0013	4	0	0	4	0	0	UQCRH	chr1	46298698	46321776