JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
URI1_chr19_29937239_30021612	0/0	g0305	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0306	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0307	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0308	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0309	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0310	1	0	1	0	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0311	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0312	1	0	0	0	0	1	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0313	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0314	1	0	0	0	0	1	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0315	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0316	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0317	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0318	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0319	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0320	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0321	1	0	0	0	0	1	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0322	1	0	0	0	0	1	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0323	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0324	1	0	0	1	0	0	URI1	chr19	29937239	30021612
URI1_chr19_29937239_30021612	0/0	g0325	1	1	0	0	0	0	URI1	chr19	29937239	30021612
URM1_chr9_128366374_128397016	0/0	g0001	59	2	10	35	3	9	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0002	19	0	1	14	1	3	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0003	10	10	0	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0004	10	9	1	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0005	10	0	0	9	0	1	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/1	g0006	7	1	0	1	0	4	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0007	7	0	0	6	0	1	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0008	6	0	0	6	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0009	6	5	1	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0010	6	0	3	2	1	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0011	5	0	2	3	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0012	5	0	3	0	0	2	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0013	5	0	1	4	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0014	4	2	2	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0015	4	1	1	0	1	1	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0016	4	4	0	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0017	4	0	0	4	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0018	4	0	0	4	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0019	4	0	0	4	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0020	3	0	1	1	1	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0021	3	0	3	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0022	3	3	0	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0023	3	0	0	3	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0024	3	0	0	3	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0025	3	0	0	3	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0026	2	2	0	0	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0027	2	0	0	1	0	1	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0028	2	0	0	2	0	0	URM1	chr9	128366374	128397016
URM1_chr9_128366374_128397016	0/0	g0029	2	0	0	2	0	0	URM1	chr9	128366374	128397016