JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
UTP20_chr12_101275105_101391618	0/0	g0335	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0336	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0337	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0338	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0339	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0340	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0341	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0342	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0343	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0344	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0345	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0346	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0347	1	0	0	1	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0348	1	0	1	0	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0349	1	1	0	0	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0350	1	1	0	0	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0351	1	0	1	0	0	0	UTP20	chr12	101275105	101391618
UTP20_chr12_101275105_101391618	0/0	g0352	1	0	0	0	1	0	UTP20	chr12	101275105	101391618
UTP23_chr8_116761524_116779684	1/0	g0001	144	3	19	109	3	9	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/1	g0002	57	0	17	20	7	12	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0003	47	36	2	2	1	6	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0004	26	0	3	22	1	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0005	19	17	2	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0006	18	11	3	0	1	3	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0007	17	0	15	1	1	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0008	12	11	1	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0009	7	0	5	0	1	1	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0010	4	4	0	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0011	3	1	0	0	1	1	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0012	3	2	1	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0013	2	0	0	2	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0014	2	2	0	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0015	2	2	0	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0016	1	0	0	0	0	1	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0017	1	1	0	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0018	1	0	0	1	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0019	1	0	0	0	0	1	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0020	1	0	1	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0021	1	0	1	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0022	1	1	0	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0023	1	0	0	1	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0024	1	0	0	1	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0025	1	0	0	0	0	1	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0026	1	0	0	1	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0027	1	0	0	1	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0028	1	1	0	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0029	1	0	1	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0030	1	0	0	1	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0031	1	0	1	0	0	0	UTP23	chr8	116761524	116779684
UTP23_chr8_116761524_116779684	0/0	g0032	1	0	0	1	0	0	UTP23	chr8	116761524	116779684