JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
VASN_chr16_4366848_4388538	0/0	g0099	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0100	1	0	0	1	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0101	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0102	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0103	1	0	0	1	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0104	1	0	0	1	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0105	1	0	0	1	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0106	1	0	1	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0107	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0108	1	0	1	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0109	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0110	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0111	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0112	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0113	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0114	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0115	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0116	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0117	1	0	0	1	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0118	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/1	g0119	1	0	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0120	1	0	0	0	1	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0121	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0122	1	0	1	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0123	1	0	1	0	0	0	VASN	chr16	4366848	4388538
VASN_chr16_4366848_4388538	0/0	g0124	1	1	0	0	0	0	VASN	chr16	4366848	4388538
VASP_chr19_45502479_45531983	0/0	g0001	6	3	1	2	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0002	6	0	0	6	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0003	5	0	0	3	1	1	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0004	4	0	1	3	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0005	4	0	1	2	1	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0006	4	0	3	0	1	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0007	4	2	0	2	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0008	3	3	0	0	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0009	3	3	0	0	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0010	3	0	0	3	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0011	3	0	1	2	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0012	3	0	0	3	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0013	3	3	0	0	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0014	3	0	2	0	0	1	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0015	3	1	2	0	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0016	2	0	0	0	0	2	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0017	2	0	0	2	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0018	2	0	0	2	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0019	2	0	0	2	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0020	2	0	2	0	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0021	2	0	1	1	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0022	2	0	1	1	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0023	2	0	2	0	0	0	VASP	chr19	45502479	45531983
VASP_chr19_45502479_45531983	0/0	g0024	2	0	0	2	0	0	VASP	chr19	45502479	45531983