JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BPGM_chr7_134641853_134684816	0/0	g0180	1	0	1	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0181	1	0	0	1	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0182	1	0	0	1	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0183	1	0	0	1	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0184	1	0	0	1	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0185	1	1	0	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0186	1	0	1	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0187	1	1	0	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0188	1	1	0	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0189	1	1	0	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0190	1	1	0	0	0	0	BPGM	chr7	134641853	134684816
BPGM_chr7_134641853_134684816	0/0	g0191	1	0	1	0	0	0	BPGM	chr7	134641853	134684816
BPHL_chr6_3113711_3158578	0/1	g0001	10	0	1	7	0	1	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0002	8	0	0	5	0	3	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0003	7	0	2	5	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0004	6	0	0	6	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0005	5	5	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0006	4	3	1	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0007	4	1	3	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0008	4	0	4	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0009	4	0	3	1	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0010	3	0	0	3	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0011	3	0	0	3	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0012	3	0	3	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0013	3	0	0	2	1	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0014	3	0	0	3	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0015	3	3	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0016	3	3	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0017	2	2	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0018	2	2	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0019	2	2	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0020	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0021	2	1	0	1	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0022	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0023	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0024	2	0	1	1	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0025	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0026	2	0	0	0	0	2	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0027	2	0	2	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0028	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0029	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0030	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0031	2	0	0	2	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0032	2	0	2	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0033	2	0	1	1	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0034	2	1	1	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0035	2	2	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0036	2	2	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0037	2	2	0	0	0	0	BPHL	chr6	3113711	3158578
BPHL_chr6_3113711_3158578	0/0	g0038	2	2	0	0	0	0	BPHL	chr6	3113711	3158578