JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
VPS26C_chr21_37218422_37272334	0/0	g0307	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0308	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0309	1	0	1	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0310	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0311	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0312	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0313	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0314	1	0	1	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0315	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0316	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0317	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0318	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0319	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0320	1	0	1	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0321	1	0	0	1	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0322	1	0	0	1	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0323	1	0	0	1	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0324	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0325	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0326	1	0	0	1	0	0	VPS26C	chr21	37218422	37272334
VPS26C_chr21_37218422_37272334	0/0	g0327	1	1	0	0	0	0	VPS26C	chr21	37218422	37272334
VPS28_chr8_144418617_144433548	0/0	g0001	129	24	21	61	4	19	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/1	g0002	109	12	28	51	4	13	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0003	46	0	7	39	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0004	12	5	4	0	1	2	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0005	9	9	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0006	8	0	0	8	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0007	6	1	4	0	0	1	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0008	6	5	1	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0009	6	0	0	6	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0010	6	4	0	0	0	2	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0011	5	5	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0012	4	4	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0013	4	3	0	1	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0014	3	0	3	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0015	2	2	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0016	2	2	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0017	2	2	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0018	2	0	1	0	1	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0019	2	2	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0020	2	0	0	2	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0021	2	1	1	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0022	1	1	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0023	1	0	0	0	1	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0024	1	1	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0025	1	0	1	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0026	1	0	0	0	1	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0027	1	0	0	1	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0028	1	1	0	0	0	0	VPS28	chr8	144418617	144433548
VPS28_chr8_144418617_144433548	0/0	g0029	1	1	0	0	0	0	VPS28	chr8	144418617	144433548