JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BPIFB1_chr20_33278214_33314871	0/0	g0258	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0259	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0260	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0261	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0262	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0263	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0264	1	1	0	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0265	1	0	1	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0266	1	0	1	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0267	1	0	1	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB1_chr20_33278214_33314871	0/0	g0268	1	0	1	0	0	0	BPIFB1	chr20	33278214	33314871
BPIFB2_chr20_33002704_33028703	1/1	g0001	90	3	28	38	4	15	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0002	19	0	1	18	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0003	17	0	0	12	0	5	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0004	11	0	1	6	4	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0005	10	0	2	7	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0006	9	0	0	9	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0007	8	0	8	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0008	7	0	0	7	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0009	6	0	2	4	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0010	5	5	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0011	4	1	3	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0012	4	4	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0013	4	4	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0014	4	0	3	0	1	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0015	4	0	4	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0016	4	0	0	4	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0017	4	0	0	4	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0018	3	1	1	0	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0019	3	0	0	3	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0020	3	2	1	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0021	2	2	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0022	2	0	0	2	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0023	2	0	0	2	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0024	2	2	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0025	2	2	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0026	2	0	1	0	1	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0027	2	2	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0028	2	2	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0029	2	0	0	2	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0030	2	0	0	1	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0031	2	0	1	0	1	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0032	2	0	1	0	1	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0033	2	0	0	1	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0034	2	0	2	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0035	2	0	0	0	1	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0036	2	0	0	2	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0037	2	0	0	0	0	2	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0038	2	0	1	0	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0039	2	0	0	0	0	2	BPIFB2	chr20	33002704	33028703