JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BPIFB2_chr20_33002704_33028703	0/0	g0140	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0141	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0142	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0143	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0144	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0145	1	0	0	1	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0146	1	0	1	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0147	1	0	0	0	1	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0148	1	0	0	0	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0149	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0150	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0151	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0152	1	0	1	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0153	1	0	0	1	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0154	1	0	0	1	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0155	1	0	0	1	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0156	1	0	0	0	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0157	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0158	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0159	1	0	0	0	0	1	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0160	1	0	0	1	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0161	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0162	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB2_chr20_33002704_33028703	0/0	g0163	1	1	0	0	0	0	BPIFB2	chr20	33002704	33028703
BPIFB3_chr20_33048903_33078847	0/1	g0001	58	0	15	28	1	13	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0002	34	0	6	28	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0003	28	0	6	17	0	5	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0004	10	7	2	0	1	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0005	10	0	5	0	3	2	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0006	7	0	3	1	0	3	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0007	7	7	0	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0008	6	0	0	6	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0009	5	0	4	0	0	1	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0010	5	0	0	5	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0011	5	5	0	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0012	4	0	0	4	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0013	4	0	3	0	1	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0014	4	4	0	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0015	3	0	1	2	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0016	3	1	2	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0017	3	3	0	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0018	3	0	0	0	1	2	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0019	3	3	0	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0020	3	2	0	0	1	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0021	3	3	0	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0022	3	0	0	3	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0023	3	0	3	0	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0024	3	0	0	3	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0025	3	0	0	3	0	0	BPIFB3	chr20	33048903	33078847
BPIFB3_chr20_33048903_33078847	0/0	g0026	3	0	1	2	0	0	BPIFB3	chr20	33048903	33078847