JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
VWA5B2_chr3_184224585_184247329	0/0	g0059	1	0	0	0	0	1	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0060	1	0	0	1	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0061	1	0	0	1	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0062	1	0	1	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0063	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0064	1	0	1	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0065	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0066	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0067	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0068	1	0	0	1	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0069	1	0	0	1	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0070	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0071	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0072	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0073	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0074	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0075	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0076	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0077	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0078	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA5B2_chr3_184224585_184247329	0/0	g0079	1	1	0	0	0	0	VWA5B2	chr3	184224585	184247329
VWA7_chr6_31760590_31782328	0/0	g0001	28	0	6	16	2	4	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0002	17	0	3	13	0	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0003	12	0	5	3	2	2	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0004	11	0	0	10	0	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0005	10	4	3	0	1	2	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0006	10	6	3	0	1	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0007	9	0	2	6	0	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0008	7	6	1	0	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0009	7	0	1	5	0	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0010	7	0	0	7	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0011	6	2	0	4	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0012	6	0	0	6	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0013	4	4	0	0	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0014	3	1	1	1	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0015	3	1	0	2	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0016	3	2	0	0	0	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0017	3	3	0	0	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0018	3	2	0	0	0	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0019	3	0	1	2	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0020	3	0	0	1	0	2	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0021	3	1	0	0	1	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0022	3	1	1	0	1	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0023	3	1	0	2	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0024	2	2	0	0	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0025	2	0	0	0	1	1	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0026	2	2	0	0	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0027	2	0	1	0	1	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0028	2	0	2	0	0	0	VWA7	chr6	31760590	31782328
VWA7_chr6_31760590_31782328	0/0	g0029	2	0	1	1	0	0	VWA7	chr6	31760590	31782328