JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WASL_chr7_123676943_123754003	0/0	g0294	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0295	1	0	0	0	0	1	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0296	1	0	0	1	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0297	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0298	1	1	0	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0299	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0300	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0301	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0302	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0303	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0304	1	1	0	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0305	1	1	0	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0306	1	1	0	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0307	1	1	0	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0308	1	0	0	1	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0309	1	0	0	1	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0310	1	0	0	0	0	1	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0311	1	0	1	0	0	0	WASL	chr7	123676943	123754003
WASL_chr7_123676943_123754003	0/0	g0312	1	0	0	0	0	1	WASL	chr7	123676943	123754003
WAS_chrX_48678799_48696427	0/0	g0001	144	22	28	71	6	17	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0002	73	31	14	17	4	7	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0003	12	0	0	12	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0004	9	8	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0005	7	0	7	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0006	6	6	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/1	g0007	3	0	0	0	1	1	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0008	2	2	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0009	2	1	1	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0010	2	0	1	0	0	1	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	1/0	g0011	1	0	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0012	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0013	1	0	1	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0014	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0015	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0016	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0017	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0018	1	1	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0019	1	1	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0020	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0021	1	1	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0022	1	1	0	0	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0023	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WAS_chrX_48678799_48696427	0/0	g0024	1	0	0	1	0	0	WAS	chrX	48678799	48696427
WBP11_chr12_14779582_14808478	0/0	g0001	101	18	18	42	7	16	WBP11	chr12	14779582	14808478
WBP11_chr12_14779582_14808478	0/0	g0002	33	0	15	12	1	5	WBP11	chr12	14779582	14808478
WBP11_chr12_14779582_14808478	0/0	g0003	32	11	4	15	0	2	WBP11	chr12	14779582	14808478
WBP11_chr12_14779582_14808478	0/0	g0004	22	0	1	17	0	4	WBP11	chr12	14779582	14808478
WBP11_chr12_14779582_14808478	0/0	g0005	18	0	7	6	2	3	WBP11	chr12	14779582	14808478
WBP11_chr12_14779582_14808478	0/0	g0006	9	0	0	9	0	0	WBP11	chr12	14779582	14808478
WBP11_chr12_14779582_14808478	0/0	g0007	7	5	2	0	0	0	WBP11	chr12	14779582	14808478