JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WBP1L_chr10_102738948_102821262	0/0	g0343	1	0	1	0	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0344	1	0	0	1	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0345	1	0	0	1	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0346	1	0	1	0	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0347	1	0	0	0	1	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0348	1	0	1	0	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0349	1	1	0	0	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0350	1	0	0	1	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0351	1	1	0	0	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0352	1	0	1	0	0	0	WBP1L	chr10	102738948	102821262
WBP1L_chr10_102738948_102821262	0/0	g0353	1	1	0	0	0	0	WBP1L	chr10	102738948	102821262
WBP1_chr2_74453438_74465881	0/1	g0001	156	39	23	82	2	9	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	1/0	g0002	133	13	44	37	14	24	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0003	44	38	6	0	0	0	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0004	7	0	0	7	0	0	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0005	2	0	1	0	0	1	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0006	1	0	1	0	0	0	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0007	1	1	0	0	0	0	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0008	1	0	1	0	0	0	WBP1	chr2	74453438	74465881
WBP1_chr2_74453438_74465881	0/0	g0009	1	1	0	0	0	0	WBP1	chr2	74453438	74465881
WBP2NL_chr22_41993788_42033475	0/0	g0001	5	0	0	5	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0002	4	0	2	0	1	1	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0003	3	0	3	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0004	3	3	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0005	3	0	1	0	0	2	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0006	3	0	0	3	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0007	2	2	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0008	2	0	2	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0009	2	0	1	0	0	1	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0010	2	0	1	0	1	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0011	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0012	2	2	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0013	2	2	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0014	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0015	2	2	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0016	2	0	0	1	0	1	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0017	2	0	0	0	1	1	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0018	2	0	0	1	0	1	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0019	2	0	2	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0020	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0021	2	1	1	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0022	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0023	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0024	2	0	1	0	1	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0025	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0026	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0027	2	0	0	2	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0028	2	2	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0029	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0030	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475