JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WBP2NL_chr22_41993788_42033475	0/0	g0331	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0332	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0333	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0334	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0335	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0336	1	0	0	0	0	1	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0337	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0338	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0339	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0340	1	0	0	1	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0341	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0342	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0343	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0344	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0345	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0346	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0347	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0348	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0349	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0350	1	1	0	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2NL_chr22_41993788_42033475	0/0	g0351	1	0	1	0	0	0	WBP2NL	chr22	41993788	42033475
WBP2_chr17_75840699_75860335	0/1	g0001	67	3	18	36	4	5	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0002	19	0	0	18	0	1	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0003	17	9	3	0	3	2	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0004	17	4	2	10	0	1	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0005	16	1	4	7	2	2	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0006	14	0	2	6	4	2	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0007	12	0	5	7	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	1/0	g0008	8	0	3	0	0	4	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0009	7	1	1	2	3	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0010	7	0	0	5	0	2	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0011	7	0	1	6	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0012	7	7	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0013	6	5	1	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0014	6	0	0	6	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0015	5	0	0	5	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0016	5	5	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0017	4	0	0	3	0	1	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0018	4	4	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0019	4	0	1	3	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0020	4	0	0	4	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0021	3	3	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0022	3	3	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0023	3	1	1	0	0	1	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0024	3	1	2	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0025	3	1	1	0	0	1	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0026	3	3	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0027	2	2	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0028	2	2	0	0	0	0	WBP2	chr17	75840699	75860335
WBP2_chr17_75840699_75860335	0/0	g0029	2	1	1	0	0	0	WBP2	chr17	75840699	75860335