JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR35_chr2_19905263_19995105	0/0	g0341	1	0	0	0	0	1	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0342	1	0	1	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0343	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0344	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0345	1	0	0	0	0	1	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0346	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0347	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0348	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0349	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0350	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0351	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0352	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0353	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0354	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0355	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0356	1	0	0	0	0	1	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0357	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0358	1	0	1	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0359	1	0	1	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0360	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0361	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0362	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0363	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0364	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0365	1	0	0	1	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0366	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0367	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0368	1	0	1	0	0	0	WDR35	chr2	19905263	19995105
WDR35_chr2_19905263_19995105	0/0	g0369	1	1	0	0	0	0	WDR35	chr2	19905263	19995105
WDR36_chr5_111087348_111135502	0/0	g0001	30	1	10	13	2	4	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0002	27	2	4	20	0	1	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0003	16	0	2	13	1	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0004	11	0	0	11	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0005	7	0	0	5	0	2	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0006	6	6	0	0	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0007	6	0	2	0	1	3	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0008	5	0	0	5	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	1/0	g0009	5	0	2	2	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0010	5	0	0	4	1	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0011	5	0	0	5	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0012	5	5	0	0	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0013	5	0	5	0	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0014	5	0	1	1	1	2	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0015	4	1	2	0	1	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0016	4	0	0	2	0	2	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0017	4	3	1	0	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0018	4	0	1	3	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0019	4	4	0	0	0	0	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0020	4	0	0	3	0	1	WDR36	chr5	111087348	111135502
WDR36_chr5_111087348_111135502	0/0	g0021	4	0	3	0	0	1	WDR36	chr5	111087348	111135502