JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR37_chr10_1051385_1137372	0/0	g0354	1	1	0	0	0	0	WDR37	chr10	1051385	1137372
WDR37_chr10_1051385_1137372	0/0	g0355	1	1	0	0	0	0	WDR37	chr10	1051385	1137372
WDR37_chr10_1051385_1137372	0/0	g0356	1	0	0	0	1	0	WDR37	chr10	1051385	1137372
WDR37_chr10_1051385_1137372	0/0	g0357	1	0	1	0	0	0	WDR37	chr10	1051385	1137372
WDR37_chr10_1051385_1137372	0/0	g0358	1	0	1	0	0	0	WDR37	chr10	1051385	1137372
WDR37_chr10_1051385_1137372	0/0	g0359	1	0	1	0	0	0	WDR37	chr10	1051385	1137372
WDR37_chr10_1051385_1137372	0/0	g0360	1	0	0	1	0	0	WDR37	chr10	1051385	1137372
WDR38_chr9_124848460_124862878	0/1	g0001	90	9	19	51	2	8	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0002	52	21	14	9	2	6	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0003	51	3	1	42	0	5	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0004	49	3	16	15	5	10	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0005	26	0	1	22	0	3	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0006	18	1	4	10	1	2	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0007	15	0	8	6	0	1	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0008	10	8	2	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0009	8	8	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0010	8	8	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0011	8	0	2	6	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0012	7	0	0	7	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0013	7	1	3	0	3	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0014	5	0	0	5	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0015	5	5	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0016	5	4	1	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0017	4	4	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	1/0	g0018	4	2	1	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0019	4	0	0	4	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0020	3	2	1	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0021	3	0	0	3	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0022	3	2	1	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0023	2	2	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0024	2	0	0	2	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0025	2	2	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0026	2	1	1	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0027	2	2	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0028	2	0	0	2	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0029	1	0	0	1	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0030	1	1	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0031	1	1	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0032	1	0	0	0	0	1	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0033	1	1	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0034	1	0	0	1	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0035	1	0	0	1	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0036	1	0	0	1	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0037	1	0	0	0	1	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0038	1	1	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0039	1	1	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0040	1	0	1	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0041	1	0	0	1	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0042	1	1	0	0	0	0	WDR38	chr9	124848460	124862878
WDR38_chr9_124848460_124862878	0/0	g0043	1	1	0	0	0	0	WDR38	chr9	124848460	124862878