JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR45B_chr17_82609562_82653444	0/0	g0349	1	0	1	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0350	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0351	1	0	1	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0352	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0353	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0354	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0355	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0356	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0357	1	1	0	0	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0358	1	0	0	1	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0359	1	0	0	1	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0360	1	0	0	0	0	1	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0361	1	0	0	1	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0362	1	0	0	0	0	1	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0363	1	0	0	1	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0364	1	0	0	1	0	0	WDR45B	chr17	82609562	82653444
WDR45B_chr17_82609562_82653444	0/0	g0365	1	0	0	1	0	0	WDR45B	chr17	82609562	82653444
WDR45_chrX_49069442_49084887	0/0	g0001	129	25	17	75	2	10	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0002	52	1	18	13	8	12	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0003	25	21	4	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	1/0	g0004	17	14	2	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0005	7	6	1	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0006	6	6	0	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0007	5	0	4	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0008	3	0	0	0	0	3	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0009	3	0	0	0	1	2	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0010	2	0	2	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0011	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/1	g0012	1	0	0	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0013	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0014	1	0	0	0	0	1	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0015	1	1	0	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0016	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0017	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0018	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0019	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0020	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0021	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0022	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0023	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0024	1	0	1	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0025	1	1	0	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0026	1	1	0	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0027	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0028	1	0	1	0	0	0	WDR45	chrX	49069442	49084887
WDR45_chrX_49069442_49084887	0/0	g0029	1	0	0	1	0	0	WDR45	chrX	49069442	49084887
WDR46_chr6_33274108_33294239	0/0	g0001	83	10	15	47	2	9	WDR46	chr6	33274108	33294239
WDR46_chr6_33274108_33294239	0/0	g0002	62	1	7	41	8	5	WDR46	chr6	33274108	33294239
WDR46_chr6_33274108_33294239	0/0	g0003	21	0	4	12	1	4	WDR46	chr6	33274108	33294239
WDR46_chr6_33274108_33294239	0/0	g0004	14	1	0	13	0	0	WDR46	chr6	33274108	33294239