JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR47_chr1_108965214_109047102	0/0	g0311	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0312	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0313	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0314	1	1	0	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0315	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0316	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0317	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0318	1	0	0	0	1	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0319	1	0	0	0	0	1	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0320	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0321	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0322	1	0	0	0	0	1	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0323	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0324	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0325	1	1	0	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0326	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0327	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0328	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0329	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0330	1	0	0	1	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0331	1	1	0	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0332	1	0	1	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0333	1	1	0	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0334	1	1	0	0	0	0	WDR47	chr1	108965214	109047102
WDR47_chr1_108965214_109047102	0/0	g0335	1	1	0	0	0	0	WDR47	chr1	108965214	109047102
WDR48_chr3_39047016_39101664	0/1	g0001	23	1	3	17	1	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0002	18	0	1	13	1	3	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0003	12	6	0	6	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0004	9	0	0	9	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0005	7	0	2	4	0	1	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0006	6	0	0	5	0	1	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0007	5	5	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0008	5	0	3	2	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0009	5	0	0	5	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0010	4	0	2	2	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0011	4	4	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0012	3	0	0	3	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0013	3	0	0	3	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0014	3	2	0	1	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0015	3	3	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0016	3	0	0	3	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0017	2	0	2	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0018	2	2	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0019	2	2	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0020	2	2	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0021	2	1	1	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0022	2	0	0	1	0	1	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0023	2	0	0	2	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0024	2	2	0	0	0	0	WDR48	chr3	39047016	39101664
WDR48_chr3_39047016_39101664	0/0	g0025	2	0	0	2	0	0	WDR48	chr3	39047016	39101664