JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR59_chr16_74866362_74990123	0/0	g0268	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0269	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0270	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0271	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0272	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0273	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0274	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0275	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0276	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0277	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0278	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0279	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0280	1	0	0	0	1	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0281	1	0	1	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0282	1	0	0	0	1	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0283	1	0	0	0	1	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0284	1	0	0	0	1	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0285	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0286	1	0	1	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0287	1	0	1	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0288	1	0	1	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0289	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0290	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0291	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0292	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0293	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR59_chr16_74866362_74990123	0/0	g0294	1	1	0	0	0	0	WDR59	chr16	74866362	74990123
WDR5B_chr3_122406846_122421062	1/1	g0000	466	96	78	226	18	46	WDR5B	chr3	122406846	122421062
WDR5_chr9_134131082_134164968	0/0	g0001	29	0	6	21	0	2	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0002	24	4	3	12	1	4	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0003	14	0	2	11	0	1	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0004	9	9	0	0	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0005	8	0	0	5	1	2	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0006	7	0	3	4	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0007	5	0	2	1	1	1	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0008	5	0	1	4	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0009	4	0	0	4	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0010	4	0	0	4	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/1	g0011	4	0	0	0	3	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0012	4	0	0	4	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0013	4	3	1	0	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0014	3	2	0	0	1	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0015	3	0	0	3	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0016	3	1	0	1	0	1	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0017	3	0	1	2	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0018	3	0	1	0	1	1	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0019	3	0	0	1	2	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0020	3	0	2	0	0	1	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0021	3	0	0	3	0	0	WDR5	chr9	134131082	134164968
WDR5_chr9_134131082_134164968	0/0	g0022	3	1	2	0	0	0	WDR5	chr9	134131082	134164968