JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR64_chr1_241647281_241807777	0/0	g0307	1	0	0	1	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0308	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0309	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0310	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0311	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0312	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0313	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0314	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0315	1	0	1	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0316	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0317	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0318	1	0	1	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0319	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0320	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0321	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0322	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	1/0	g0323	1	0	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0324	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0325	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR64_chr1_241647281_241807777	0/0	g0326	1	1	0	0	0	0	WDR64	chr1	241647281	241807777
WDR6_chr3_49002391_49020951	0/0	g0001	61	14	21	15	4	7	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0002	42	10	7	19	1	5	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0003	20	1	5	12	1	1	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	1/0	g0004	12	2	3	1	3	2	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0005	11	10	1	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0006	9	3	2	0	3	1	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0007	7	2	1	4	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0008	7	3	3	1	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0009	6	2	2	0	0	2	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0010	5	5	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0011	4	4	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0012	4	4	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0013	4	0	0	0	2	2	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0014	3	3	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0015	3	3	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0016	3	0	0	3	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0017	2	0	0	2	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0018	2	0	0	2	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0019	2	0	0	2	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0020	2	1	1	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0021	2	0	0	1	1	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0022	2	0	1	1	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0023	2	1	1	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0024	1	1	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0025	1	0	0	1	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0026	1	0	0	1	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/1	g0027	1	0	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0028	1	0	0	0	0	1	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0029	1	1	0	0	0	0	WDR6	chr3	49002391	49020951
WDR6_chr3_49002391_49020951	0/0	g0030	1	1	0	0	0	0	WDR6	chr3	49002391	49020951