JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACKR2_chr3_42804445_42872286	0/0	g0316	1	1	0	0	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0317	1	0	0	1	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0318	1	0	0	1	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0319	1	0	0	1	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0320	1	0	1	0	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0321	1	0	0	1	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0322	1	0	0	0	0	1	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0323	1	0	0	0	1	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0324	1	0	0	1	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0325	1	0	0	1	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0326	1	1	0	0	0	0	ACKR2	chr3	42804445	42872286
ACKR2_chr3_42804445_42872286	0/0	g0327	1	0	1	0	0	0	ACKR2	chr3	42804445	42872286
ACKR3_chr2_236564825_236587354	1/0	g0001	69	2	15	33	5	13	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0002	23	0	4	19	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0003	20	0	2	17	0	1	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0004	20	0	1	14	0	5	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0005	15	3	3	3	1	5	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0006	9	1	0	8	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0007	8	0	1	7	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0008	8	0	0	8	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0009	7	0	1	6	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0010	7	0	1	6	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0011	6	2	0	0	0	4	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0012	6	4	1	1	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0013	5	0	0	5	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0014	5	0	4	0	0	1	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0015	5	3	2	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0016	4	4	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0017	4	4	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0018	4	0	2	0	0	2	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0019	4	0	2	2	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0020	3	0	0	3	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0021	3	0	0	3	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0022	3	0	0	3	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0023	3	3	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0024	3	3	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0025	3	2	1	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0026	3	2	1	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0027	3	3	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0028	3	3	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0029	3	3	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0030	3	0	2	1	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0031	3	0	2	0	0	1	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0032	3	0	1	1	0	1	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0033	2	2	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0034	2	0	0	0	0	2	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0035	2	2	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0036	2	2	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0037	2	2	0	0	0	0	ACKR3	chr2	236564825	236587354
ACKR3_chr2_236564825_236587354	0/0	g0038	2	2	0	0	0	0	ACKR3	chr2	236564825	236587354