JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR74_chr11_62827911_62844590	0/0	g0077	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0078	1	1	0	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0079	1	0	0	0	0	1	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0080	1	1	0	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0081	1	1	0	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0082	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0083	1	0	1	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0084	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0085	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0086	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0087	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0088	1	0	1	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0089	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0090	1	0	0	1	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0091	1	1	0	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0092	1	1	0	0	0	0	WDR74	chr11	62827911	62844590
WDR74_chr11_62827911_62844590	0/0	g0093	1	1	0	0	0	0	WDR74	chr11	62827911	62844590
WDR75_chr2_189436474_189480552	0/0	g0001	26	6	4	14	0	2	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0002	20	0	9	11	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0003	20	7	2	7	0	4	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/1	g0004	14	0	2	7	3	1	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0005	14	1	0	13	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0006	11	0	1	10	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0007	9	9	0	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0008	9	0	5	0	2	2	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0009	7	0	7	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0010	7	7	0	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0011	6	0	4	0	0	2	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0012	5	0	5	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0013	5	2	1	1	0	1	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0014	5	0	0	5	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0015	5	0	1	4	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0016	5	5	0	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0017	4	0	0	4	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0018	4	0	0	4	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0019	4	0	0	4	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0020	3	2	0	0	0	1	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0021	3	3	0	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0022	3	0	3	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0023	3	0	0	3	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0024	2	2	0	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0025	2	0	0	1	0	1	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0026	2	0	0	2	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0027	2	0	0	0	0	2	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0028	2	0	1	1	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0029	2	0	1	0	0	1	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0030	2	0	0	2	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0031	2	0	0	2	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0032	2	0	2	0	0	0	WDR75	chr2	189436474	189480552
WDR75_chr2_189436474_189480552	0/0	g0033	2	0	0	2	0	0	WDR75	chr2	189436474	189480552