JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR82_chr3_52249434_52283649	0/0	g0197	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0198	1	0	0	0	0	1	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0199	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0200	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0201	1	0	1	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0202	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0203	1	0	0	0	0	1	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0204	1	0	0	0	0	1	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0205	1	0	1	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0206	1	0	1	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0207	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0208	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0209	1	0	1	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0210	1	0	1	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0211	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/1	g0212	1	0	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0213	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0214	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0215	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0216	1	0	1	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0217	1	0	0	0	1	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0218	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0219	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0220	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0221	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0222	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0223	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0224	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0225	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0226	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0227	1	1	0	0	0	0	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0228	1	0	0	0	0	1	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0229	1	0	0	0	0	1	WDR82	chr3	52249434	52283649
WDR82_chr3_52249434_52283649	0/0	g0230	1	0	0	1	0	0	WDR82	chr3	52249434	52283649
WDR83OS_chr19_12663073_12674415	1/1	g0001	339	43	64	166	17	47	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0002	36	33	3	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0003	11	11	0	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0004	4	3	1	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0005	4	0	3	0	1	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0006	2	0	0	2	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0007	2	2	0	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0008	1	1	0	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0009	1	1	0	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0010	1	1	0	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0011	1	0	0	0	0	1	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0012	1	1	0	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83OS_chr19_12663073_12674415	0/0	g0013	1	0	1	0	0	0	WDR83OS	chr19	12663073	12674415
WDR83_chr19_12661807_12680832	1/0	g0001	68	6	0	46	0	15	WDR83	chr19	12661807	12680832
WDR83_chr19_12661807_12680832	0/1	g0002	48	2	12	22	6	5	WDR83	chr19	12661807	12680832
WDR83_chr19_12661807_12680832	0/0	g0003	43	1	9	18	6	9	WDR83	chr19	12661807	12680832