JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR86_chr7_151376124_151415038	0/0	g0414	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0415	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0416	1	0	0	0	0	1	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0417	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0418	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0419	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0420	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0421	1	0	0	0	1	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0422	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0423	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0424	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0425	1	1	0	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0426	1	1	0	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0427	1	1	0	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0428	1	0	1	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0429	1	0	0	0	0	1	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0430	1	1	0	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0431	1	1	0	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0432	1	0	0	0	0	1	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0433	1	0	1	0	0	0	WDR86	chr7	151376124	151415038
WDR86_chr7_151376124_151415038	0/0	g0434	1	0	0	1	0	0	WDR86	chr7	151376124	151415038
WDR87_chr19_37879823_37911594	0/0	g0001	23	0	1	21	0	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0002	18	4	5	8	0	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0003	18	0	2	10	5	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	1/0	g0004	13	1	5	4	1	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0005	8	2	4	0	2	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0006	5	4	1	0	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0007	5	5	0	0	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0008	5	0	0	4	0	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0009	5	1	1	3	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0010	4	2	1	1	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0011	4	0	1	2	0	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0012	4	1	3	0	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0013	3	2	0	1	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0014	3	0	0	3	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0015	3	0	0	3	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0016	3	0	0	3	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/1	g0017	3	0	1	0	1	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0018	3	0	0	0	3	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0019	3	3	0	0	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0020	3	3	0	0	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0021	2	0	0	2	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0022	2	1	0	0	1	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0023	2	0	0	0	0	2	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0024	2	0	0	2	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0025	2	0	0	2	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0026	2	0	0	2	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0027	2	0	0	2	0	0	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0028	2	0	0	1	0	1	WDR87	chr19	37879823	37911594
WDR87_chr19_37879823_37911594	0/0	g0029	2	0	2	0	0	0	WDR87	chr19	37879823	37911594