JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WDR90_chr16_644365_672830	0/0	g0247	1	0	1	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0248	1	0	0	1	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0249	1	0	1	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0250	1	0	1	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0251	1	0	0	0	0	1	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0252	1	0	0	0	0	1	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0253	1	0	0	0	0	1	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0254	1	0	0	1	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0255	1	0	0	1	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0256	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0257	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0258	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0259	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0260	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0261	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0262	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0263	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0264	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0265	1	0	1	0	0	0	WDR90	chr16	644365	672830
WDR90_chr16_644365_672830	0/0	g0266	1	1	0	0	0	0	WDR90	chr16	644365	672830
WDR91_chr7_135178839_135216526	0/0	g0001	46	6	7	32	0	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0002	31	1	13	9	0	8	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0003	15	0	0	14	0	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0004	14	12	2	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0005	13	3	1	9	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0006	10	0	7	3	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0007	9	0	0	9	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0008	8	0	3	1	0	4	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0009	6	0	4	1	0	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0010	5	5	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0011	5	5	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0012	5	0	0	5	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0013	5	0	0	5	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0014	5	0	0	5	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/1	g0015	4	0	2	0	0	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0016	4	1	1	0	1	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0017	4	3	1	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0018	3	3	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0019	3	3	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0020	3	0	1	0	1	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0021	3	3	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0022	3	0	1	2	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0023	3	1	1	0	0	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0024	3	0	0	3	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0025	3	0	2	0	0	1	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0026	2	1	1	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0027	2	2	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0028	2	2	0	0	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0029	2	0	0	2	0	0	WDR91	chr7	135178839	135216526
WDR91_chr7_135178839_135216526	0/0	g0030	2	0	0	0	0	2	WDR91	chr7	135178839	135216526