JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WEE2_chr7_141703353_141736271	0/0	g0156	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0157	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0158	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0159	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0160	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0161	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0162	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0163	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0164	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0165	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0166	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0167	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0168	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0169	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0170	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0171	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0172	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0173	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0174	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0175	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0176	1	0	0	0	0	1	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0177	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0178	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0179	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0180	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0181	1	0	1	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0182	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0183	1	0	0	1	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0184	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WEE2_chr7_141703353_141736271	0/0	g0185	1	1	0	0	0	0	WEE2	chr7	141703353	141736271
WFDC10A_chr20_45624739_45636196	0/0	g0001	153	33	24	78	4	14	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	1/1	g0002	84	31	29	3	5	14	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0003	82	1	16	55	5	5	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0004	77	16	4	52	0	5	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0005	7	6	1	0	0	0	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0006	2	0	0	2	0	0	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0007	2	2	0	0	0	0	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0008	1	0	0	0	0	1	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0009	1	0	0	0	0	1	WFDC10A	chr20	45624739	45636196
WFDC10A_chr20_45624739_45636196	0/0	g0010	1	1	0	0	0	0	WFDC10A	chr20	45624739	45636196
WFDC10B_chr20_45679651_45710019	0/0	g0001	33	1	10	20	2	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0002	23	0	1	22	0	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0003	10	9	1	0	0	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0004	10	0	0	7	0	3	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0005	10	9	1	0	0	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0006	7	1	5	0	1	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0007	7	1	6	0	0	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0008	7	4	1	1	0	1	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0009	7	0	0	7	0	0	WFDC10B	chr20	45679651	45710019
WFDC10B_chr20_45679651_45710019	0/0	g0010	7	0	0	7	0	0	WFDC10B	chr20	45679651	45710019