JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WFDC1_chr16_84289878_84334844	0/0	g0392	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0393	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0394	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0395	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0396	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0397	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0398	1	0	0	0	0	1	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0399	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0400	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0401	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0402	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0403	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0404	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0405	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0406	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0407	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0408	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0409	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0410	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0411	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0412	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0413	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0414	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0415	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0416	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0417	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0418	1	0	0	0	0	1	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0419	1	0	0	0	0	1	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0420	1	0	0	0	0	1	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0421	1	0	0	0	0	1	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0422	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0423	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0424	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0425	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0426	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0427	1	0	0	1	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0428	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0429	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0430	1	0	1	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0431	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0432	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0433	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0434	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0435	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0436	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0437	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0438	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC1_chr16_84289878_84334844	0/0	g0439	1	1	0	0	0	0	WFDC1	chr16	84289878	84334844
WFDC2_chr20_45464753_45486532	1/1	g0001	105	11	25	46	6	15	WFDC2	chr20	45464753	45486532
WFDC2_chr20_45464753_45486532	0/0	g0002	47	10	11	22	0	4	WFDC2	chr20	45464753	45486532