JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WFDC9_chr20_45602939_45636284	0/0	g0146	1	1	0	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0147	1	1	0	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0148	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0149	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0150	1	0	1	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0151	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0152	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0153	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0154	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0155	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0156	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0157	1	0	1	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0158	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0159	1	0	1	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0160	1	0	1	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0161	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0162	1	0	0	0	1	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0163	1	0	1	0	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0164	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFDC9_chr20_45602939_45636284	0/0	g0165	1	0	0	1	0	0	WFDC9	chr20	45602939	45636284
WFIKKN1_chr16_625985_639117	0/1	g0001	122	16	36	51	7	11	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0002	107	1	16	65	3	22	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0003	51	17	6	13	3	12	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0004	16	15	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0005	13	13	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0006	11	0	0	11	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0007	8	0	7	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0008	7	0	1	6	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0009	7	7	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0010	7	6	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0011	5	5	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0012	4	4	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0013	3	0	2	0	1	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0014	3	1	2	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0015	2	0	0	0	0	2	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0016	2	2	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0017	2	2	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0018	2	0	2	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0019	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0020	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0021	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0022	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0023	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0024	1	0	0	0	0	1	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0025	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0026	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0027	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0028	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0029	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0030	1	0	1	0	0	0	WFIKKN1	chr16	625985	639117