JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WFIKKN1_chr16_625985_639117	0/0	g0031	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0032	1	0	0	0	0	1	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0033	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0034	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0035	1	0	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0036	1	0	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0037	1	0	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0038	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0039	1	0	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0040	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0041	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	1/0	g0042	1	0	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0043	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0044	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0045	1	0	1	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0046	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0047	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0048	1	0	0	0	0	1	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0049	1	1	0	0	0	0	WFIKKN1	chr16	625985	639117
WFIKKN1_chr16_625985_639117	0/0	g0050	1	0	0	1	0	0	WFIKKN1	chr16	625985	639117
WFIKKN2_chr17_50830586_50847353	0/1	g0001	136	13	35	66	8	13	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	1/0	g0002	92	11	26	41	6	7	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0003	49	9	7	24	4	5	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0004	35	1	0	33	0	1	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0005	20	10	1	3	0	6	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0006	8	0	0	7	0	1	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0007	7	7	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0008	7	5	1	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0009	7	7	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0010	7	7	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0011	6	5	1	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0012	5	5	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0013	5	3	0	2	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0014	4	0	0	0	0	4	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0015	4	3	1	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0016	3	2	1	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0017	2	0	0	0	0	2	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0018	2	1	1	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0019	2	1	1	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0020	1	1	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0021	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0022	1	1	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0023	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0024	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0025	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0026	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0027	1	0	0	0	0	1	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0028	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0029	1	1	0	0	0	0	WFIKKN2	chr17	50830586	50847353
WFIKKN2_chr17_50830586_50847353	0/0	g0030	1	0	0	1	0	0	WFIKKN2	chr17	50830586	50847353