JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNK3_chrX_54187823_54363046	0/0	g0149	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0150	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0151	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0152	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0153	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0154	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0155	1	1	0	0	0	0	WNK3	chrX	54187823	54363046
WNK3_chrX_54187823_54363046	0/0	g0156	1	0	0	1	0	0	WNK3	chrX	54187823	54363046
WNK4_chr17_42775610_42802066	0/0	g0001	40	7	8	15	1	9	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0002	33	1	10	20	1	1	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	1/0	g0003	16	0	1	14	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0004	11	10	1	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0005	8	0	6	0	0	2	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0006	7	0	0	7	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0007	7	1	4	0	2	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0008	6	0	0	5	0	1	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0009	6	0	6	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0010	4	0	0	0	0	4	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0011	4	4	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0012	4	4	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0013	4	4	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0014	4	4	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/1	g0015	3	0	2	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0016	3	1	1	0	1	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0017	3	0	2	0	1	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0018	3	0	0	3	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0019	3	3	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0020	3	3	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0021	3	3	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0022	3	1	0	0	0	2	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0023	3	0	1	2	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0024	3	3	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0025	3	3	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0026	2	0	0	2	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0027	2	0	0	1	0	1	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0028	2	0	1	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0029	2	1	0	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0030	2	2	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0031	2	0	0	1	0	1	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0032	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0033	1	0	0	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0034	1	0	0	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0035	1	0	0	0	1	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0036	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0037	1	0	0	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0038	1	0	0	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0039	1	0	0	0	0	1	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0040	1	0	1	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0041	1	0	1	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0042	1	1	0	0	0	0	WNK4	chr17	42775610	42802066