JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNK4_chr17_42775610_42802066	0/0	g0093	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0094	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0095	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0096	1	0	1	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0097	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0098	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0099	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0100	1	0	0	1	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0101	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0102	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0103	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0104	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0105	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNK4_chr17_42775610_42802066	0/0	g0106	1	1	0	0	0	0	WNK4	chr17	42775610	42802066
WNT10A_chr2_218875852_218898928	0/0	g0001	30	3	7	13	3	4	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0002	19	0	3	13	0	3	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0003	17	1	1	14	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0004	17	1	6	8	0	2	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/1	g0005	12	0	1	10	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0006	11	8	1	2	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0007	10	0	2	6	0	2	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0008	10	0	0	9	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0009	9	6	1	0	0	2	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0010	8	6	0	1	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0011	8	7	1	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0012	7	0	0	7	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0013	7	0	0	6	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0014	6	0	1	4	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0015	5	0	1	4	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0016	5	0	1	4	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	1/0	g0017	5	0	0	3	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0018	4	0	2	2	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0019	4	0	4	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0020	4	0	0	3	1	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0021	4	0	2	1	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0022	4	0	0	4	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0023	3	0	0	3	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0024	3	3	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0025	3	3	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0026	3	0	0	3	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0027	3	0	3	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0028	3	1	0	2	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0029	2	2	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0030	2	2	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0031	2	2	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0032	2	0	1	0	0	1	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0033	2	2	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0034	2	2	0	0	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0035	2	0	0	2	0	0	WNT10A	chr2	218875852	218898928
WNT10A_chr2_218875852_218898928	0/0	g0036	2	0	0	2	0	0	WNT10A	chr2	218875852	218898928