JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNT11_chr11_76181325_76211502	0/0	g0161	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0162	1	0	1	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0163	1	0	0	0	0	1	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0164	1	0	0	0	0	1	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0165	1	0	0	0	0	1	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0166	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0167	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0168	1	0	1	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0169	1	0	0	0	0	1	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0170	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0171	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0172	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0173	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0174	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0175	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0176	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0177	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0178	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0179	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0180	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0181	1	0	1	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0182	1	0	1	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0183	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0184	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0185	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0186	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0187	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0188	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0189	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0190	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0191	1	1	0	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0192	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0193	1	0	1	0	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0194	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT11_chr11_76181325_76211502	0/0	g0195	1	0	0	1	0	0	WNT11	chr11	76181325	76211502
WNT16_chr7_121324000_121346104	0/0	g0001	31	0	6	22	2	1	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/1	g0002	29	5	9	12	0	2	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0003	28	0	1	25	0	2	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0004	27	3	4	14	1	5	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0005	25	17	4	2	0	2	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0006	20	1	4	11	0	4	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0007	18	10	1	3	0	4	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0008	18	0	4	13	1	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0009	11	0	8	0	3	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	1/0	g0010	10	0	2	6	1	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0011	10	7	1	1	0	1	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0012	7	7	0	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0013	6	0	2	3	0	1	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0014	6	0	0	6	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0015	5	0	2	3	0	0	WNT16	chr7	121324000	121346104