JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNT3_chr17_46757506_46823692	0/0	g0263	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0264	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0265	1	0	1	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0266	1	0	1	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0267	1	0	1	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0268	1	0	0	0	0	1	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0269	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0270	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0271	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0272	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0273	1	0	0	1	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0274	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0275	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0276	1	0	1	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0277	1	0	0	0	1	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0278	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT3_chr17_46757506_46823692	0/0	g0279	1	1	0	0	0	0	WNT3	chr17	46757506	46823692
WNT4_chr1_22112313_22148097	0/0	g0001	15	0	0	14	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0002	14	0	6	7	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0003	14	0	4	8	1	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0004	10	0	1	8	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0005	8	0	3	0	1	4	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0006	7	0	1	4	0	2	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0007	6	0	6	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0008	5	0	0	5	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0009	5	0	0	5	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0010	4	4	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0011	4	0	0	4	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0012	4	1	0	2	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0013	4	0	0	3	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/1	g0014	4	2	0	0	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0015	4	0	4	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0016	4	0	0	4	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0017	4	0	4	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0018	3	3	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0019	3	0	0	3	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0020	3	1	2	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0021	3	0	0	3	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0022	3	0	0	3	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0023	3	0	0	2	1	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0024	3	3	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0025	3	3	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0026	3	0	0	0	0	3	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0027	3	0	0	3	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0028	3	2	1	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0029	2	0	2	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0030	2	2	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0031	2	2	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0032	2	0	1	0	1	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0033	2	0	0	2	0	0	WNT4	chr1	22112313	22148097