JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNT4_chr1_22112313_22148097	0/0	g0234	1	0	1	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0235	1	1	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0236	1	1	0	0	0	0	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0237	1	0	0	0	0	1	WNT4	chr1	22112313	22148097
WNT4_chr1_22112313_22148097	0/0	g0238	1	0	0	1	0	0	WNT4	chr1	22112313	22148097
WNT5A_chr3_55460715_55492306	0/0	g0001	24	7	2	10	0	5	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0002	18	0	0	13	1	4	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0003	15	0	3	8	1	3	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0004	11	0	0	8	1	2	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0005	9	8	1	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0006	8	1	7	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0007	7	0	1	4	0	2	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0008	7	0	1	5	1	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0009	5	0	1	4	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0010	5	1	3	0	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0011	5	0	1	0	1	3	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0012	5	0	2	0	0	3	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0013	3	0	2	0	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0014	3	0	2	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0015	3	0	0	2	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0016	3	2	0	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0017	3	1	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0018	3	0	0	3	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0019	3	3	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0020	2	0	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0021	2	0	1	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0022	2	0	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0023	2	0	0	2	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0024	2	0	0	2	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0025	2	0	0	2	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0026	2	0	0	2	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0027	2	0	1	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0028	2	0	0	1	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0029	2	0	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0030	2	0	0	2	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0031	2	0	0	2	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0032	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0033	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0034	2	0	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0035	2	1	1	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0036	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0037	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0038	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0039	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0040	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0041	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0042	2	0	0	1	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0043	2	0	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0044	2	0	2	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0045	2	2	0	0	0	0	WNT5A	chr3	55460715	55492306