JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNT5A_chr3_55460715_55492306	0/0	g0196	1	0	0	0	1	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0197	1	0	0	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0198	1	1	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/1	g0199	1	0	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0200	1	0	1	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0201	1	0	0	0	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0202	1	0	0	0	0	1	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0203	1	1	0	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0204	1	0	0	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0205	1	0	1	0	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0206	1	0	0	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0207	1	0	0	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0208	1	0	0	1	0	0	WNT5A	chr3	55460715	55492306
WNT5A_chr3_55460715_55492306	0/0	g0209	1	0	1	0	0	0	WNT5A	chr3	55460715	55492306
WNT5B_chr12_1624231_1652212	0/0	g0001	39	4	5	28	0	2	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0002	13	1	7	2	3	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0003	12	3	0	9	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0004	9	4	1	3	0	1	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0005	8	0	0	8	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0006	8	0	0	8	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0007	7	4	1	0	0	2	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0008	7	0	7	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0009	7	0	0	7	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0010	6	1	2	3	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0011	6	0	0	6	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0012	6	0	0	6	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0013	5	0	3	2	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0014	5	1	2	1	0	1	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0015	4	0	0	4	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0016	4	0	0	4	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0017	3	3	0	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0018	3	0	0	0	0	3	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0019	3	2	1	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0020	3	2	1	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0021	3	1	0	2	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0022	3	0	0	3	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0023	3	0	0	3	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0024	3	0	2	1	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0025	3	0	3	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0026	3	0	0	3	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0027	3	0	0	3	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0028	3	0	3	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0029	2	2	0	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0030	2	0	1	0	0	1	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0031	2	2	0	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0032	2	2	0	0	0	0	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0033	2	0	1	0	0	1	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0034	2	0	0	0	0	2	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0035	2	0	1	0	0	1	WNT5B	chr12	1624231	1652212
WNT5B_chr12_1624231_1652212	0/0	g0036	2	0	0	0	0	2	WNT5B	chr12	1624231	1652212