JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WT1_chr11_32382775_32440539	0/0	g0297	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0298	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0299	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0300	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0301	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0302	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0303	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0304	1	0	0	1	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0305	1	0	0	1	0	0	WT1	chr11	32382775	32440539
WT1_chr11_32382775_32440539	0/0	g0306	1	1	0	0	0	0	WT1	chr11	32382775	32440539
WTAP_chr6_159722506_159761319	0/0	g0001	22	0	2	15	1	4	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0002	20	6	6	6	1	1	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0003	18	2	2	13	0	1	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0004	17	0	8	7	0	2	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0005	14	0	0	14	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0006	7	0	4	3	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0007	7	7	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	1/0	g0008	5	0	2	2	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0009	5	0	0	4	0	1	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0010	5	0	0	5	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0011	5	5	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0012	5	0	1	1	1	2	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0013	5	0	2	3	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0014	5	0	5	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0015	4	4	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0016	4	0	4	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0017	4	0	4	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0018	3	0	3	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0019	3	0	0	2	1	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0020	3	0	0	3	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/1	g0021	3	1	0	0	0	1	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0022	3	3	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0023	3	3	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0024	3	3	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0025	3	3	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0026	3	0	3	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0027	3	0	0	3	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0028	2	2	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0029	2	0	0	2	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0030	2	0	0	2	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0031	2	0	0	2	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0032	2	0	0	0	2	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0033	2	0	0	2	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0034	2	0	0	0	0	2	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0035	2	0	1	0	0	1	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0036	2	1	0	0	0	1	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0037	2	2	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0038	2	2	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0039	2	2	0	0	0	0	WTAP	chr6	159722506	159761319
WTAP_chr6_159722506_159761319	0/0	g0040	2	0	2	0	0	0	WTAP	chr6	159722506	159761319