JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YARS1_chr1_32770239_32822358	0/0	g0316	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0317	1	0	0	0	0	1	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0318	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0319	1	0	0	0	0	1	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0320	1	0	0	0	1	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0321	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0322	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0323	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0324	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS1_chr1_32770239_32822358	0/0	g0325	1	0	1	0	0	0	YARS1	chr1	32770239	32822358
YARS2_chr12_32741544_32760897	1/0	g0001	125	7	27	74	3	13	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0002	60	9	10	33	3	5	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0003	31	13	12	3	0	3	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0004	17	3	4	9	0	1	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/1	g0005	14	1	5	2	3	2	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0006	12	9	3	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0007	9	2	3	2	0	2	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0008	7	0	4	0	0	3	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0009	6	5	1	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0010	5	5	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0011	5	5	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0012	4	3	0	1	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0013	4	1	3	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0014	4	4	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0015	3	0	0	1	0	2	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0016	3	0	0	2	0	1	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0017	3	1	1	1	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0018	3	0	0	3	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0019	3	3	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0020	2	2	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0021	2	2	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0022	2	1	1	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0023	2	0	0	0	0	2	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0024	2	0	0	0	0	2	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0025	2	0	0	2	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0026	2	0	0	2	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0027	2	0	0	0	1	1	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0028	2	2	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0029	2	2	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0030	1	0	0	0	0	1	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0031	1	0	0	0	0	1	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0032	1	0	0	1	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0033	1	0	0	1	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0034	1	1	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0035	1	0	0	1	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0036	1	1	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0037	1	1	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0038	1	1	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0039	1	1	0	0	0	0	YARS2	chr12	32741544	32760897
YARS2_chr12_32741544_32760897	0/0	g0040	1	1	0	0	0	0	YARS2	chr12	32741544	32760897