JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YBEY_chr21_46281342_46302751	0/0	g0356	1	0	0	1	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0357	1	0	0	1	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0358	1	0	0	0	0	1	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0359	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0360	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0361	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0362	1	0	0	1	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0363	1	0	0	0	0	1	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0364	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0365	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0366	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0367	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0368	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0369	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0370	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0371	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0372	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0373	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0374	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0375	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0376	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0377	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0378	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0379	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0380	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0381	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0382	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0383	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0384	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0385	1	0	1	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0386	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0387	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0388	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBEY_chr21_46281342_46302751	0/0	g0389	1	1	0	0	0	0	YBEY	chr21	46281342	46302751
YBX1_chr1_42677418_42708805	0/1	g0001	27	1	3	19	0	3	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0002	19	2	4	11	1	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0003	18	6	4	1	3	4	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0004	14	0	1	11	0	2	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0005	13	0	1	9	1	2	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0006	12	0	0	12	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0007	7	0	2	5	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0008	6	1	0	5	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0009	6	0	1	5	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0010	6	1	0	3	1	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0011	6	0	3	2	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0012	5	0	2	0	1	2	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0013	5	0	1	1	1	2	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0014	5	0	3	2	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0015	5	0	5	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0016	4	1	2	0	1	0	YBX1	chr1	42677418	42708805