JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YBX1_chr1_42677418_42708805	0/0	g0167	1	0	0	1	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0168	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0169	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0170	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0171	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0172	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0173	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0174	1	0	0	1	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0175	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0176	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0177	1	0	1	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0178	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0179	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0180	1	0	0	1	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0181	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0182	1	0	1	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0183	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0184	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0185	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0186	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0187	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0188	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0189	1	0	0	0	0	1	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0190	1	0	1	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0191	1	0	1	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0192	1	0	1	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0193	1	0	1	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0194	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0195	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0196	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0197	1	1	0	0	0	0	YBX1	chr1	42677418	42708805
YBX1_chr1_42677418_42708805	0/0	g0198	1	0	0	1	0	0	YBX1	chr1	42677418	42708805
YBX2_chr17_7283263_7299639	0/0	g0001	68	2	26	23	5	12	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	1/1	g0002	64	3	15	31	3	10	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0003	55	1	5	46	0	3	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0004	52	12	11	18	6	5	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0005	21	5	4	6	3	3	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0006	20	0	0	20	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0007	17	6	0	11	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0008	14	13	1	0	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0009	13	2	6	5	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0010	12	0	0	12	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0011	9	9	0	0	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0012	6	0	0	6	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0013	6	3	3	0	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0014	6	6	0	0	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0015	5	4	1	0	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0016	5	4	1	0	0	0	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0017	4	0	0	1	0	3	YBX2	chr17	7283263	7299639
YBX2_chr17_7283263_7299639	0/0	g0018	3	0	1	2	0	0	YBX2	chr17	7283263	7299639