JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YBX3_chr12_10694089_10728323	0/0	g0154	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0155	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0156	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0157	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0158	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0159	1	1	0	0	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0160	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0161	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0162	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0163	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0164	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0165	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0166	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0167	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0168	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0169	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0170	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0171	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0172	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0173	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0174	1	0	0	1	0	0	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0175	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0176	1	0	0	0	0	1	YBX3	chr12	10694089	10728323
YBX3_chr12_10694089_10728323	0/0	g0177	1	1	0	0	0	0	YBX3	chr12	10694089	10728323
YDJC_chr22_21623089_21635022	1/1	g0001	207	48	43	86	9	19	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0002	104	3	17	71	3	10	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0003	24	0	0	22	0	2	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0004	16	15	1	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0005	16	1	8	0	1	6	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0006	11	10	1	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0007	10	9	0	1	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0008	6	1	1	1	1	2	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0009	5	4	1	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0010	3	3	0	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0011	3	0	0	0	0	3	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0012	2	0	0	2	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0013	2	2	0	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0014	2	0	0	0	0	2	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0015	1	0	0	1	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0016	1	1	0	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0017	1	0	0	1	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0018	1	0	0	0	0	1	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0019	1	0	0	1	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0020	1	1	0	0	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0021	1	0	0	1	0	0	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0022	1	0	0	0	0	1	YDJC	chr22	21623089	21635022
YDJC_chr22_21623089_21635022	0/0	g0023	1	0	0	1	0	0	YDJC	chr22	21623089	21635022
YEATS2_chr3_183692797_183817624	0/0	g0001	1	1	0	0	0	0	YEATS2	chr3	183692797	183817624
YEATS2_chr3_183692797_183817624	0/0	g0002	1	0	0	0	0	1	YEATS2	chr3	183692797	183817624
YEATS2_chr3_183692797_183817624	0/0	g0003	1	0	1	0	0	0	YEATS2	chr3	183692797	183817624