JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YJU2_chr19_4242080_4274088	0/0	g0359	1	0	0	1	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0360	1	0	0	1	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0361	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0362	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0363	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0364	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0365	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0366	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0367	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0368	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0369	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0370	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0371	1	0	0	1	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0372	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YJU2_chr19_4242080_4274088	0/0	g0373	1	1	0	0	0	0	YJU2	chr19	4242080	4274088
YKT6_chr7_44195978_44219294	0/0	g0001	90	8	19	46	6	11	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0002	66	7	23	29	2	5	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	1/1	g0003	56	8	11	22	4	9	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0004	36	3	0	30	1	2	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0005	17	0	4	13	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0006	13	12	1	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0007	9	9	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0008	7	0	0	7	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0009	7	3	4	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0010	6	6	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0011	5	5	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0012	5	0	0	5	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0013	4	0	0	4	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0014	4	3	1	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0015	3	3	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0016	3	0	0	1	0	2	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0017	3	1	0	2	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0018	3	1	0	1	0	1	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0019	3	0	0	3	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0020	2	2	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0021	2	0	2	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0022	2	0	0	2	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0023	2	0	0	2	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0024	2	0	1	0	0	1	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0025	2	2	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0026	2	2	0	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0027	2	1	1	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0028	2	0	2	0	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0029	2	0	0	0	1	1	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0030	2	0	0	0	0	2	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0031	2	0	0	2	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0032	2	1	0	0	1	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0033	2	0	0	2	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0034	1	0	0	1	0	0	YKT6	chr7	44195978	44219294
YKT6_chr7_44195978_44219294	0/0	g0035	1	0	0	1	0	0	YKT6	chr7	44195978	44219294