JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YME1L1_chr10_27105111_27159384	0/0	g0297	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0298	1	0	0	0	1	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0299	1	0	0	0	0	1	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0300	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0301	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0302	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0303	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0304	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0305	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0306	1	0	0	0	0	1	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0307	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0308	1	0	0	0	0	1	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0309	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0310	1	0	0	0	0	1	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0311	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0312	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0313	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0314	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0315	1	0	0	0	0	1	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0316	1	0	1	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0317	1	0	0	1	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0318	1	0	0	1	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0319	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0320	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0321	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YME1L1_chr10_27105111_27159384	0/0	g0322	1	1	0	0	0	0	YME1L1	chr10	27105111	27159384
YOD1_chr1_207038849_207056208	0/1	g0001	126	10	23	72	4	16	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0002	47	16	17	0	6	8	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0003	30	4	7	12	5	2	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0004	19	0	6	13	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0005	17	0	1	15	0	1	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0006	17	0	9	8	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0007	12	9	3	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0008	11	0	0	11	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0009	10	9	1	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0010	9	9	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0011	8	0	0	8	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0012	6	6	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0013	6	6	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0014	5	5	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0015	4	0	0	4	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	1/0	g0016	4	0	1	0	1	1	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0017	4	4	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0018	4	0	1	3	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0019	4	4	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0020	3	0	1	0	1	1	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0021	3	0	0	3	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0022	3	3	0	0	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0023	2	0	0	2	0	0	YOD1	chr1	207038849	207056208
YOD1_chr1_207038849_207056208	0/0	g0024	2	0	0	2	0	0	YOD1	chr1	207038849	207056208