JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
YWHAG_chr7_76321799_76363991	0/0	g0287	1	1	0	0	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0288	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0289	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0290	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0291	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0292	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0293	1	0	1	0	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0294	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0295	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0296	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0297	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0298	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0299	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0300	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0301	1	0	0	0	1	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0302	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0303	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0304	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0305	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0306	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0307	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0308	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0309	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0310	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0311	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0312	1	0	1	0	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0313	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0314	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0315	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0316	1	1	0	0	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0317	1	1	0	0	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0318	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0319	1	0	1	0	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0320	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0321	1	0	0	0	0	1	YWHAG	chr7	76321799	76363991
YWHAG_chr7_76321799_76363991	0/0	g0322	1	0	0	1	0	0	YWHAG	chr7	76321799	76363991
YWHAH_chr22_31939535_31962603	0/0	g0001	27	1	11	12	0	3	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0002	17	0	6	5	2	4	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0003	11	0	0	10	0	1	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0004	10	9	1	0	0	0	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0005	9	0	7	1	0	1	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0006	9	0	5	2	2	0	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0007	8	0	0	7	0	1	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0008	7	0	2	1	2	2	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0009	7	0	2	3	0	2	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0010	6	0	1	3	0	2	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0011	5	0	0	5	0	0	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0012	5	0	1	1	0	3	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0013	5	0	1	4	0	0	YWHAH	chr22	31939535	31962603
YWHAH_chr22_31939535_31962603	0/0	g0014	5	0	2	3	0	0	YWHAH	chr22	31939535	31962603