JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB11_chr3_101643889_101682132	0/0	g0220	1	1	0	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0221	1	0	1	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0222	1	1	0	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0223	1	1	0	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0224	1	0	1	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0225	1	0	0	1	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0226	1	1	0	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0227	1	1	0	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB11_chr3_101643889_101682132	0/0	g0228	1	1	0	0	0	0	ZBTB11	chr3	101643889	101682132
ZBTB12_chr6_31894613_31907086	0/1	g0001	160	55	30	51	8	15	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0002	83	5	14	49	5	10	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0003	25	14	5	0	1	5	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0004	22	0	3	17	0	2	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0005	17	0	7	10	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0006	16	0	6	8	0	2	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0007	12	0	0	12	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0008	11	2	2	2	0	5	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0009	11	0	3	7	1	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0010	5	0	3	0	2	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0011	5	0	2	2	0	1	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0012	4	0	0	1	0	3	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0013	4	4	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0014	4	0	3	0	1	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0015	3	0	1	2	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0016	3	2	1	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0017	2	0	0	2	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0018	2	0	0	1	0	1	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0019	2	0	0	2	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0020	2	0	2	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0021	2	1	1	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0022	2	0	0	2	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0023	2	0	0	2	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0024	1	0	1	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0025	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0026	1	0	0	1	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0027	1	0	0	1	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0028	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0029	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0030	1	0	0	1	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0031	1	0	0	1	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0032	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0033	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0034	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0035	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0036	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0037	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0038	1	0	0	1	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0039	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0040	1	0	0	1	0	0	ZBTB12	chr6	31894613	31907086
ZBTB12_chr6_31894613_31907086	0/0	g0041	1	1	0	0	0	0	ZBTB12	chr6	31894613	31907086