JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB21_chr21_41981831_42015360	0/0	g0255	1	0	1	0	0	0	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0256	1	1	0	0	0	0	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0257	1	0	0	1	0	0	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0258	1	0	0	1	0	0	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0259	1	1	0	0	0	0	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0260	1	1	0	0	0	0	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0261	1	0	0	0	0	1	ZBTB21	chr21	41981831	42015360
ZBTB21_chr21_41981831_42015360	0/0	g0262	1	0	0	0	0	1	ZBTB21	chr21	41981831	42015360
ZBTB22_chr6_33309418_33322744	0/0	g0001	112	15	17	69	5	6	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0002	67	0	13	40	4	10	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0003	47	34	4	6	0	3	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/1	g0004	34	14	11	4	0	4	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0005	29	2	6	15	1	5	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0006	20	3	2	14	0	1	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0007	9	4	1	2	0	2	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0008	7	0	2	2	0	3	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0009	7	1	2	1	0	3	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0010	7	5	1	0	0	1	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0011	6	0	1	5	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0012	5	2	1	2	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0013	4	4	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0014	4	1	2	1	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0015	4	0	1	3	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0016	3	0	0	3	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0017	3	0	0	2	0	1	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0018	3	3	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0019	2	1	0	0	0	1	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0020	2	2	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0021	2	0	0	2	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0022	1	0	0	1	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0023	1	0	0	0	0	1	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0024	1	1	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0025	1	0	0	1	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0026	1	1	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0027	1	0	0	1	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0028	1	1	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0029	1	0	0	1	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0030	1	0	1	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0031	1	0	0	1	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0032	1	0	1	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0033	1	0	0	0	0	1	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0034	1	1	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0035	1	1	0	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0036	1	0	1	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB22_chr6_33309418_33322744	0/0	g0037	1	0	1	0	0	0	ZBTB22	chr6	33309418	33322744
ZBTB24_chr6_109457594_109488219	0/0	g0001	52	8	7	27	3	7	ZBTB24	chr6	109457594	109488219
ZBTB24_chr6_109457594_109488219	0/0	g0002	39	0	8	27	0	4	ZBTB24	chr6	109457594	109488219
ZBTB24_chr6_109457594_109488219	0/0	g0003	30	1	7	15	3	4	ZBTB24	chr6	109457594	109488219
ZBTB24_chr6_109457594_109488219	0/0	g0004	13	0	2	9	1	1	ZBTB24	chr6	109457594	109488219
ZBTB24_chr6_109457594_109488219	0/0	g0005	11	2	3	2	2	2	ZBTB24	chr6	109457594	109488219