JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB32_chr19_35699558_35722038	0/0	g0164	1	0	0	0	0	1	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0165	1	1	0	0	0	0	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0166	1	1	0	0	0	0	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0167	1	1	0	0	0	0	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0168	1	0	0	1	0	0	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0169	1	0	0	1	0	0	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0170	1	1	0	0	0	0	ZBTB32	chr19	35699558	35722038
ZBTB32_chr19_35699558_35722038	0/0	g0171	1	0	0	1	0	0	ZBTB32	chr19	35699558	35722038
ZBTB33_chrX_120245812_120263398	1/1	g0001	269	56	52	131	8	20	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0002	29	1	3	23	0	2	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0003	14	13	1	0	0	0	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0004	13	0	4	7	0	2	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0005	4	4	0	0	0	0	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0006	2	0	0	0	1	1	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0007	1	1	0	0	0	0	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0008	1	1	0	0	0	0	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0009	1	0	0	0	0	1	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0010	1	0	1	0	0	0	ZBTB33	chrX	120245812	120263398
ZBTB33_chrX_120245812_120263398	0/0	g0011	1	0	0	1	0	0	ZBTB33	chrX	120245812	120263398
ZBTB34_chr9_126855639_126890878	0/0	g0001	5	0	3	1	0	1	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0002	3	2	1	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0003	2	2	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0004	2	0	1	0	1	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0005	2	0	0	2	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0006	2	0	0	2	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0007	2	0	0	2	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0008	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0009	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0010	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0011	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0012	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0013	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0014	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0015	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0016	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0017	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0018	1	0	1	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0019	1	0	0	0	0	1	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0020	1	0	0	0	0	1	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0021	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0022	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0023	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0024	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0025	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0026	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0027	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0028	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0029	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0030	1	0	0	1	0	0	ZBTB34	chr9	126855639	126890878
ZBTB34_chr9_126855639_126890878	0/0	g0031	1	1	0	0	0	0	ZBTB34	chr9	126855639	126890878